Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
abcb10ATP binding cassette subfamily B member 10. (744 aa)    
Predicted Functional Partners:
ENSSTUP00000077990
ATP-binding cassette, sub-family B (MDR/TAP), member 7.
   
 0.934
LOC115175926
Tapasin-like.
   
 0.912
LOC115173543
Tapasin-like.
   
 0.912
fech
Ferrochelatase.
   
 
 0.880
suox
Sulfite oxidase.
     
 0.767
ENSSTUP00000007486
annotation not available
   
 0.753
LOC115192495
Calreticulin-like.
   
 0.753
LOC115158152
UV excision repair protein RAD23 homolog B-like.
   
 0.753
ENSSTUP00000088013
annotation not available
   
 0.753
LOC115158393
Calreticulin-like.
   
 0.753
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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