Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115201301Mucolipin-1-like. (565 aa)    
Predicted Functional Partners:
mcoln2
Mucolipin 2.
     
  0.845
LOC115169546
Mucolipin-3-like.
     
  0.770
MCOLN3
Mucolipin-3-like.
     
  0.770
trpm2
Transient receptor potential cation channel subfamily M member 2.
     
 0.612
mrpl30
Mitochondrial ribosomal protein L30.
      
 0.545
ENSSTUP00000037893
Peptide deformylase, mitochondrial.
    
   0.514
LOC115196877
Peptide deformylase, mitochondrial-like.
    
   0.514
ENSSTUP00000058074
annotation not available
      
 0.505
ENSSTUP00000094199
Transcription factor EB.
      
 0.505
vps18
VPS18 core subunit of CORVET and HOPS complexes.
      
 0.500
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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