Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC115196328Insulin-like growth factor-binding protein 5. (269 aa)    
Predicted Functional Partners:
LOC115197190
Insulin-like growth factor II.
   
 0.913
LOC115198816
Insulin-like growth factor-binding protein complex acid labile subunit.
    
 0.794
LOC115171199
Insulin-like growth factor-binding protein complex acid labile subunit.
    
 0.794
LOC115159544
Pappalysin-1-like.
    
 0.756
ENSSTUP00000038934
Pappalysin 2.
    
 0.756
ENSSTUP00000046776
Pregnancy-associated plasma protein A, pappalysin 1a.
    
 0.756
LOC115156992
Pappalysin-2-like.
    
 0.756
LOC115198940
Insulin-like growth factor I.
     
 0.754
LOC115180501
Insulin-like growth factor I.
     
 0.754
LOC115201373
Extracellular serine/threonine protein kinase FAM20C-like.
    
  0.648
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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