Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC115180210Serine-threonine kinase receptor-associated protein-like. (331 aa)    
Predicted Functional Partners:
gemin6
Gem nuclear organelle associated protein 6.
    
 0.978
LOC115162125
Gem-associated protein 2-like.
   
 0.975
LOC115172395
Gem-associated protein 2-like.
   
 0.975
LOC115154299
Gem-associated protein 5-like.
    
 0.972
LOC115196094
Gem-associated protein 8-like.
    
 0.964
ddx20
DEAD-box helicase 20.
    
 
 0.964
LOC115179174
Gem-associated protein 8-like.
    
 0.964
ENSSTUP00000021234
Gem (nuclear organelle) associated protein 7.
    
 0.962
LOC115205940
Gem-associated protein 7-like.
    
 0.962
LOC115206036
Gem-associated protein 4-like.
    
 0.954
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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