Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
Experiments
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[Homology]
Score
LOC115201486Mitogen-activated protein kinase kinase kinase 21-like. (1071 aa)    
Predicted Functional Partners:
LOC115208730
Dual specificity mitogen-activated protein kinase kinase 7-like.
   
 0.942
LOC115178289
Dual specificity mitogen-activated protein kinase kinase 7-like.
   
 0.942
map3k9
Mitogen-activated protein kinase kinase kinase 9.
     
  0.874
LOC115150657
Cell division control protein 42 homolog.
   
  0.858
ENSSTUP00000047803
annotation not available
   
  0.858
LOC115165776
Cell division control protein 42 homolog.
   
  0.858
CDC42
Cell division control protein 42 homolog.
   
  0.858
LOC115162967
Mitogen-activated protein kinase kinase kinase 10-like.
     
  0.853
LOC115205926
Mitogen-activated protein kinase kinase kinase 10-like.
     
  0.853
ENSSTUP00000063869
Mitogen-activated protein kinase 8 interacting protein 1a.
    
 0.815
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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