Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSSTUP00000003582Cholinergic receptor, nicotinic, beta 1 (muscle) like. (478 aa)    
Predicted Functional Partners:
LOC115172955
Neuronal acetylcholine receptor subunit alpha-2-like.
  
 
 
0.891
ENSSTUP00000089586
Cholinergic receptor, nicotinic, alpha 4b.
  
 
 
0.889
LOC115160852
ly6/PLAUR domain-containing protein 6-like.
    
  0.836
LOC115155538
ly6/PLAUR domain-containing protein 6-like.
    
  0.836
LYPD6
LY6/PLAUR domain containing 6.
    
  0.836
ENSSTUP00000005813
Cholinergic receptor, nicotinic, alpha 2b (neuronal).
    
  0.830
LOC115175169
Neuronal acetylcholine receptor subunit alpha-2-like.
    
  0.830
ENSSTUP00000070825
Cholinergic receptor, nicotinic, alpha 4a.
    
  0.830
LOC115160851
ly6/PLAUR domain-containing protein 6B-like.
    
 0.808
ENSSTUP00000018717
LY6/PLAUR domain containing 6B.
    
 0.808
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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