Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000003596Hemoglobin alpha embryonic-3. (129 aa)    
Predicted Functional Partners:
LOC115171214
Hemoglobin subunit beta-like.
  
0.956
LOC115198944
Hemoglobin subunit beta.
  
0.955
LOC115171215
Hemoglobin subunit beta-1.
  
0.953
ENSSTUP00000003641
annotation not available
  
  0.938
LOC115152951
Hemoglobin subunit beta-2-like.
  
0.928
LOC115201350
Hemoglobin subunit beta-2-like.
  
0.928
ENSSTUP00000003567
annotation not available
   
  0.904
ENSSTUP00000017314
annotation not available
    
 0.845
LOC115182862
Haptoglobin-like.
    
 0.845
LOC115186780
Haptoglobin-like.
    
 0.845
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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