Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115197225Suppressor of cytokine signaling 7-like. (810 aa)    
Predicted Functional Partners:
ENSSTUP00000048643
annotation not available
    
 0.871
ELOC
elongin-C.
    
 0.871
LOC115148624
Cullin-5-like.
    
 0.866
LOC115163298
Cullin-5.
    
 0.866
CUL5
Cullin-5-like.
    
 0.866
LOC115154112
Cullin-5-like.
    
 0.866
LOC115198021
Signal transducer and activator of transcription 5B-like.
    
 0.832
ENSSTUP00000059373
Signal transducer and activator of transcription 5b.
    
 0.832
LOC115167799
Signal transducer and activator of transcription 6-like.
    
 0.832
ENSSTUP00000089137
Signal transducer and activator of transcription 5a.
    
 0.832
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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