Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115206674BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2-like. (366 aa)    
Predicted Functional Partners:
LOC115169859
UBX domain-containing protein 7-like.
    
 
 0.842
LOC115156844
UBX domain-containing protein 7-like.
    
 
 0.842
LOC115168749
UBX domain-containing protein 1-like.
    
 
 0.823
ENSSTUP00000084283
UBX domain protein 1.
    
 
 0.823
LOC115205866
Cullin-3-like.
    
 0.739
CUL3
Cullin-3-like.
    
 0.739
LOC115157472
Cullin-3-like.
    
 0.739
LOC115162911
Cullin-3.
    
 0.739
LOC115192500
FAS-associated factor 1-like.
    
 
 0.697
ENSSTUP00000097830
Fas (TNFRSF6) associated factor 1.
    
 
 0.697
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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