Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF236Zinc finger protein 236-like. (1855 aa)    
Predicted Functional Partners:
ercc6
ERCC excision repair 6, chromatin remodeling factor.
   
  0.754
tfb2m
Transcription factor B2, mitochondrial.
    
 
 0.745
LOC115198581
Trithorax group protein osa-like.
    
 
 0.743
LOC115200971
Calpain-15-like.
    
 
 0.717
LOC115159929
Calpain-15-like.
    
 
 0.717
ENSSTUP00000011104
DOT1-like histone H3K79 methyltransferase.
      
 0.669
LOC115158259
Histone-lysine N-methyltransferase, H3 lysine-79 specific-like.
      
 0.669
LOC115165250
Transcription factor ETV7-like.
    
 
 0.667
LOC115158603
Mediator of RNA polymerase II transcription subunit 8-like.
      
 0.626
LOC115192318
Mediator of RNA polymerase II transcription subunit 8.
      
 0.626
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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