Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115194246Cytosolic beta-glucosidase-like. (495 aa)    
Predicted Functional Partners:
LOC115147680
Lysosomal alpha-glucosidase-like.
  
 0.933
ENSSTUP00000073828
annotation not available
  
 0.933
LOC115183747
Lysosomal alpha-glucosidase-like.
  
 0.933
LOC115148427
Beta-glucuronidase-like.
    
 0.922
LOC115153890
Beta-glucuronidase-like.
    
 0.922
ENSSTUP00000005989
annotation not available
  
 0.903
ENSSTUP00000006061
annotation not available
  
 0.903
GAA
Lysosomal alpha-glucosidase-like.
  
 0.903
gla
Galactosidase alpha.
     
 0.870
LOC115155400
Beta-galactosidase-like.
  
 
 0.870
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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