Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115148988Protein transport protein SEC31-like. (315 aa)    
Predicted Functional Partners:
ENSSTUP00000032284
annotation not available
    
 
 0.619
LOC115206509
Chordin-like.
    
 
 0.619
ENSSTUP00000010327
Prolylcarboxypeptidase (angiotensinase C).
     
 0.570
dpp7
Dipeptidyl peptidase 7.
     
 0.570
xpnpep2
X-prolyl aminopeptidase 2.
   
 
 0.485
LOC115147387
xaa-Pro aminopeptidase 1-like.
   
 
 0.485
LOC115147387-2
xaa-Pro aminopeptidase 1-like.
   
 
 0.485
LOC115207481
Protein amnionless-like.
   
 
  0.480
ENSSTUP00000101488
Amnion associated transmembrane protein.
   
 
  0.480
LOC115163144
Membrane frizzled-related protein-like.
    
  0.438
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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