Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115169316Signal-regulatory protein beta-2-like. (343 aa)    
Predicted Functional Partners:
LOC115182697
TYRO protein tyrosine kinase-binding protein-like.
   
 0.768
LOC115177431
TYRO protein tyrosine kinase-binding protein-like.
   
 0.768
LOC115149292
Tyrosine-protein phosphatase non-receptor type 11.
    
  0.731
LOC115177393
Tyrosine-protein phosphatase non-receptor type 6-like.
    
  0.731
LOC115159262
Tyrosine-protein phosphatase non-receptor type 11-like.
    
  0.731
LOC115168968
Tyrosine-protein phosphatase non-receptor type 11-like.
    
  0.731
LOC115166080
Tyrosine-protein phosphatase non-receptor type 11-like.
    
  0.731
LOC115187775
Tyrosine-protein phosphatase non-receptor type 6-like.
    
  0.731
LOC115162542
Uncharacterized LOC115162542.
     
  0.631
LOC115192548
Tyrosine-protein kinase ZAP-70-like.
    
  0.617
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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