Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ENSSTUP00000004845Tetratricopeptide repeat domain 5. (447 aa)    
Predicted Functional Partners:
ENSSTUP00000112184
ATM serine/threonine kinase.
    
 0.916
JMY
Junction-mediating and -regulatory protein-like.
    
 0.909
JMY-2
Junction-mediating and -regulatory protein-like.
    
 0.909
ENSSTUP00000016287
Acetylserotonin O-methyltransferase-like.
  
  0.904
ENSSTUP00000023803
Adenylate kinase 9.
  
 
 0.891
LOC115201079
Delta-1-pyrroline-5-carboxylate synthase-like.
  
 0.868
ENSSTUP00000032866
annotation not available
  
 0.868
LOC115158195
Delta-1-pyrroline-5-carboxylate synthase-like.
  
 0.868
LOC115163755
GMP synthase [glutamine-hydrolyzing].
  
 
 0.865
ENSSTUP00000074783
Guanine monophosphate synthase.
  
 
 0.865
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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