Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIF4G1Eukaryotic translation initiation factor 4 gamma 1-like. (1732 aa)    
Predicted Functional Partners:
ncbp2
Nuclear cap binding protein subunit 2.
    
 0.952
LOC115162196
Eukaryotic translation initiation factor 4E-like.
   
 0.943
ENSSTUP00000078380
Eukaryotic translation initiation factor 4ea.
   
 0.943
LOC115172478
Eukaryotic translation initiation factor 4E.
   
 0.943
LOC115202775
Eukaryotic translation initiation factor 4E-1B-like.
   
 0.943
LOC115171400
Nuclear cap-binding protein subunit 1.
   
 0.940
NCBP1
Nuclear cap-binding protein subunit 1-like.
   
 0.940
ENSSTUP00000037393
Eukaryotic translation initiation factor 4, gamma 2a.
   
 
0.934
ENSSTUP00000052603
annotation not available
   
 
0.934
LOC115197567
Eukaryotic translation initiation factor 4 gamma 2-like.
   
 
0.934
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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