LOC115191705 protein (Salmo trutta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Salmo trutta

NCBI taxonomy Id: 8032
Other names: S. trutta, river trout

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... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSTUP00000012287	LOC115153978	ENSSTUP00000012287	ENSSTUP00000014422	annotation not available	Kinesin-1 heavy chain-like.	0.743
ENSSTUP00000012287	LOC115160849	ENSSTUP00000012287	ENSSTUP00000015774	annotation not available	Kinesin heavy chain-like.	0.796
ENSSTUP00000012287	LOC115169327	ENSSTUP00000012287	ENSSTUP00000035523	annotation not available	Kinesin-1 heavy chain.	0.743
ENSSTUP00000012287	LOC115191705	ENSSTUP00000012287	ENSSTUP00000005322	annotation not available	Fasciculation and elongation protein zeta-2-like.	0.674
ENSSTUP00000012287	LOC115195874	ENSSTUP00000012287	ENSSTUP00000029396	annotation not available	Kinesin-1 heavy chain.	0.743
ENSSTUP00000061526	LOC115191705	ENSSTUP00000061526	ENSSTUP00000005322	annotation not available	Fasciculation and elongation protein zeta-2-like.	0.804
ENSSTUP00000082819	LOC115191705	ENSSTUP00000082819	ENSSTUP00000005322	annotation not available	Fasciculation and elongation protein zeta-2-like.	0.804
LOC115153978	ENSSTUP00000012287	ENSSTUP00000014422	ENSSTUP00000012287	Kinesin-1 heavy chain-like.	annotation not available	0.743
LOC115153978	LOC115160849	ENSSTUP00000014422	ENSSTUP00000015774	Kinesin-1 heavy chain-like.	Kinesin heavy chain-like.	0.796
LOC115153978	LOC115166198	ENSSTUP00000014422	ENSSTUP00000021426	Kinesin-1 heavy chain-like.	Kinesin heavy chain-like.	0.743
LOC115153978	LOC115191705	ENSSTUP00000014422	ENSSTUP00000005322	Kinesin-1 heavy chain-like.	Fasciculation and elongation protein zeta-2-like.	0.674
LOC115160849	ENSSTUP00000012287	ENSSTUP00000015774	ENSSTUP00000012287	Kinesin heavy chain-like.	annotation not available	0.796
LOC115160849	LOC115153978	ENSSTUP00000015774	ENSSTUP00000014422	Kinesin heavy chain-like.	Kinesin-1 heavy chain-like.	0.796
LOC115160849	LOC115166198	ENSSTUP00000015774	ENSSTUP00000021426	Kinesin heavy chain-like.	Kinesin heavy chain-like.	0.796
LOC115160849	LOC115169327	ENSSTUP00000015774	ENSSTUP00000035523	Kinesin heavy chain-like.	Kinesin-1 heavy chain.	0.796
LOC115160849	LOC115191705	ENSSTUP00000015774	ENSSTUP00000005322	Kinesin heavy chain-like.	Fasciculation and elongation protein zeta-2-like.	0.674
LOC115160849	LOC115195874	ENSSTUP00000015774	ENSSTUP00000029396	Kinesin heavy chain-like.	Kinesin-1 heavy chain.	0.796
LOC115166198	LOC115153978	ENSSTUP00000021426	ENSSTUP00000014422	Kinesin heavy chain-like.	Kinesin-1 heavy chain-like.	0.743
LOC115166198	LOC115160849	ENSSTUP00000021426	ENSSTUP00000015774	Kinesin heavy chain-like.	Kinesin heavy chain-like.	0.796
LOC115166198	LOC115169327	ENSSTUP00000021426	ENSSTUP00000035523	Kinesin heavy chain-like.	Kinesin-1 heavy chain.	0.743