Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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[Homology]
Score
LOC115149376Chondroitin sulfate N-acetylgalactosaminyltransferase 1-like. (565 aa)    
Predicted Functional Partners:
b3gat3
Beta-1,3-glucuronyltransferase 3.
    
 0.960
LOC115153006
Chondroitin sulfate N-acetylgalactosaminyltransferase 2-like.
    
  0.943
LOC115194009
Chondroitin sulfate N-acetylgalactosaminyltransferase 2-like.
    
  0.943
LOC115156105
Chondroitin sulfate synthase 2-like.
    
 0.927
LOC115154803
Chondroitin sulfate glucuronyltransferase-like.
    
 0.927
chsy3
Chondroitin sulfate synthase 3.
    
 0.927
ENSSTUP00000072689
Chondroitin polymerizing factor 2.
    
 0.927
LOC115160680
Chondroitin sulfate synthase 2-like.
    
 0.927
LOC115203464
Chondroitin sulfate synthase 1-like.
    
 0.914
LOC115166859
Chondroitin sulfate synthase 1-like.
    
 0.914
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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