Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC115155665Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A-like. (673 aa)    
Predicted Functional Partners:
LOC115200030
Heat-stable enterotoxin receptor-like.
     
 0.909
ENSSTUP00000074366
Guanylate cyclase 2C.
     
 0.909
LOC115201328
Heat-stable enterotoxin receptor-like.
     
 0.909
LOC115153591
Heat-stable enterotoxin receptor-like.
     
 0.909
ak8
Adenylate kinase 8.
     
 0.900
ENSSTUP00000058294
annotation not available
    
 0.893
CALML6
Calmodulin like 6.
    
 0.893
NT5M
5',3'-nucleotidase, mitochondrial.
     
 0.890
ENSSTUP00000094580
annotation not available
     
 0.890
LOC115161910
Adenylate cyclase type 8-like.
     
 0.887
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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