STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000006000annotation not available (240 aa)    
Predicted Functional Partners:
sugt1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
    
 0.570
LOC115151792
DNA-binding protein RFXANK-like.
    
 0.561
LOC115175857
DNA-binding protein RFX5-like.
    
 0.541
LOC115173608
DNA-binding protein RFX5-like.
    
 0.541
LOC115153309
ubiquitin-40S ribosomal protein S27a-like.
    
  0.512
rps27a
Ribosomal protein S27a.
    
  0.512
LOC115202951
Receptor-interacting serine/threonine-protein kinase 2-like.
   
 0.511
ENSSTUP00000011248
Adhesion G protein-coupled receptor G1.
   
 0.511
LOC115170051
Receptor-interacting serine/threonine-protein kinase 2-like.
   
 0.511
LOC115156667
Receptor-interacting serine/threonine-protein kinase 2-like.
   
 0.511
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.