Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115205473Chromobox protein homolog 8-like. (440 aa)    
Predicted Functional Partners:
LOC115205470
E3 SUMO-protein ligase CBX4-like.
    
 0.974
LOC115178172
E3 SUMO-protein ligase CBX4-like.
    
0.974
LOC115208615
E3 SUMO-protein ligase CBX4-like.
    
0.974
LOC115171669
E3 SUMO-protein ligase CBX4-like.
    
0.974
LOC115171428
Chromobox protein homolog 2-like.
    
0.961
LOC115202570
Chromobox protein homolog 2-like.
    
0.961
LOC115201675
Chromobox protein homolog 2-like.
    
0.961
LOC115153497
Chromobox protein homolog 2-like.
    
0.961
ENSSTUP00000015486
Ring finger protein 2.
    
 0.960
LOC115170243
E3 ubiquitin-protein ligase RING2-like.
    
 0.960
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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