Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC115192303Beta-1,4-galactosyltransferase 6-like. (382 aa)    
Predicted Functional Partners:
st3gal5
ST3 beta-galactoside alpha-2,3-sialyltransferase 5.
     
 0.942
LOC115149531
Ceramide glucosyltransferase.
     
 0.940
LOC115160183
Ceramide glucosyltransferase-like.
     
 0.940
LOC115192478
Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A-like.
   
 
 0.938
arsa
Arylsulfatase A.
     
 0.922
LOC115170056
Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A-like.
   
 
 0.912
LOC115156662
Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A-like.
   
 
 0.912
ENSSTUP00000041728
Glucosidase, beta (bile acid) 2.
     
 0.891
glb1
Galactosidase beta 1.
     
 0.891
LOC115197752
Beta-hexosaminidase subunit alpha-like.
     
 0.890
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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