STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000006992annotation not available (203 aa)    
Predicted Functional Partners:
LOC115165358
Small nuclear ribonucleoprotein G.
   
 0.996
LOC115150656
Small nuclear ribonucleoprotein E.
   
 0.990
LOC115150656-2
Small nuclear ribonucleoprotein E.
   
 0.990
ddx46
DEAD-box helicase 46.
    
 0.985
LOC115206431
Small nuclear ribonucleoprotein Sm D2-like.
   
 0.983
LOC115154043
Small nuclear ribonucleoprotein Sm D2-like.
   
 0.983
SNRPD2
Small nuclear ribonucleoprotein Sm D2.
   
 0.983
LOC115173878
Small nuclear ribonucleoprotein Sm D1-like.
   
 0.982
lsm10
LSM10, U7 small nuclear RNA associated.
   
 0.982
SNRPD1
Small nuclear ribonucleoprotein D1 polypeptide.
   
 0.982
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.