Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115150561Uncharacterized protein C3orf20-like. (797 aa)    
Predicted Functional Partners:
ENSSTUP00000016135
Ts translation elongation factor, mitochondrial.
  
 0.979
LOC115207822
Elongation factor Ts, mitochondrial.
  
 0.979
mrpl2
Mitochondrial ribosomal protein L2.
  
 0.967
LOC115173824
39S ribosomal protein L36, mitochondrial-like.
  
 0.965
mrps6
Mitochondrial ribosomal protein S6.
  
 0.964
ENSSTUP00000075112
Mitochondrial ribosomal protein L9.
  
 0.963
MRPL20
Mitochondrial ribosomal protein L20.
  
 0.949
ENSSTUP00000045351
Mitochondrial ribosomal protein L20.
  
 0.949
LOC115171917
39S ribosomal protein L12, mitochondrial-like.
  
 0.947
ENSSTUP00000058625
annotation not available
  
 0.947
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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