LOC115158585 protein (Salmo trutta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

LOC115158585

Gelsolin-like. (721 aa)

Predicted Functional Partners:

PIP4K2B

0.796

ENSSTUP00000006086

0.796

ENSSTUP00000034875

0.796

ENSSTUP00000045000

0.796

ENSSTUP00000047165

0.796

ENSSTUP00000056861

0.796

ENSSTUP00000068800

0.796

ENSSTUP00000069254

0.796

LOC115200270

0.796

LOC115152006

0.796

Your Current Organism:

Salmo trutta

NCBI taxonomy Id: 8032
Other names: S. trutta, river trout

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSTUP00000006086	ENSSTUP00000034875	ENSSTUP00000006086	ENSSTUP00000034875	annotation not available	Phosphoinositide kinase, FYVE finger containing.	0.881
ENSSTUP00000006086	ENSSTUP00000045000	ENSSTUP00000006086	ENSSTUP00000045000	annotation not available	Phosphoinositide kinase, FYVE finger containing.	0.881
ENSSTUP00000006086	ENSSTUP00000047165	ENSSTUP00000006086	ENSSTUP00000047165	annotation not available	annotation not available	0.769
ENSSTUP00000006086	ENSSTUP00000068800	ENSSTUP00000006086	ENSSTUP00000068800	annotation not available	Phosphatidylinositol-5-phosphate 4-kinase, type II, alpha a.	0.794
ENSSTUP00000006086	LOC115152006	ENSSTUP00000006086	ENSSTUP00000098066	annotation not available	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha.	0.794
ENSSTUP00000006086	LOC115158585	ENSSTUP00000006086	ENSSTUP00000007239	annotation not available	Gelsolin-like.	0.796
ENSSTUP00000006086	LOC115200270	ENSSTUP00000006086	ENSSTUP00000074178	annotation not available	Phosphatidylinositol 4-phosphate 5-kinase type-1 beta-like.	0.867
ENSSTUP00000006086	PIP4K2B	ENSSTUP00000006086	ENSSTUP00000005223	annotation not available	Phosphatidylinositol-5-phosphate 4-kinase type 2 beta.	0.769
ENSSTUP00000034875	ENSSTUP00000006086	ENSSTUP00000034875	ENSSTUP00000006086	Phosphoinositide kinase, FYVE finger containing.	annotation not available	0.881
ENSSTUP00000034875	ENSSTUP00000047165	ENSSTUP00000034875	ENSSTUP00000047165	Phosphoinositide kinase, FYVE finger containing.	annotation not available	0.881
ENSSTUP00000034875	ENSSTUP00000056861	ENSSTUP00000034875	ENSSTUP00000056861	Phosphoinositide kinase, FYVE finger containing.	Phosphatidylinositol-5-phosphate 4-kinase, type II, gamma a.	0.881
ENSSTUP00000034875	ENSSTUP00000068800	ENSSTUP00000034875	ENSSTUP00000068800	Phosphoinositide kinase, FYVE finger containing.	Phosphatidylinositol-5-phosphate 4-kinase, type II, alpha a.	0.881
ENSSTUP00000034875	ENSSTUP00000069254	ENSSTUP00000034875	ENSSTUP00000069254	Phosphoinositide kinase, FYVE finger containing.	Phosphatidylinositol-5-phosphate 4-kinase, type II, gamma b.	0.881
ENSSTUP00000034875	LOC115152006	ENSSTUP00000034875	ENSSTUP00000098066	Phosphoinositide kinase, FYVE finger containing.	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha.	0.881
ENSSTUP00000034875	LOC115158585	ENSSTUP00000034875	ENSSTUP00000007239	Phosphoinositide kinase, FYVE finger containing.	Gelsolin-like.	0.796
ENSSTUP00000034875	LOC115200270	ENSSTUP00000034875	ENSSTUP00000074178	Phosphoinositide kinase, FYVE finger containing.	Phosphatidylinositol 4-phosphate 5-kinase type-1 beta-like.	0.750
ENSSTUP00000034875	PIP4K2B	ENSSTUP00000034875	ENSSTUP00000005223	Phosphoinositide kinase, FYVE finger containing.	Phosphatidylinositol-5-phosphate 4-kinase type 2 beta.	0.881
ENSSTUP00000045000	ENSSTUP00000006086	ENSSTUP00000045000	ENSSTUP00000006086	Phosphoinositide kinase, FYVE finger containing.	annotation not available	0.881
ENSSTUP00000045000	ENSSTUP00000047165	ENSSTUP00000045000	ENSSTUP00000047165	Phosphoinositide kinase, FYVE finger containing.	annotation not available	0.881
ENSSTUP00000045000	ENSSTUP00000056861	ENSSTUP00000045000	ENSSTUP00000056861	Phosphoinositide kinase, FYVE finger containing.	Phosphatidylinositol-5-phosphate 4-kinase, type II, gamma a.	0.881