Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000007652Neutral cholesterol ester hydrolase 1a. (394 aa)    
Predicted Functional Partners:
ENSSTUP00000039366
Bradykinin receptor B1.
    
 0.962
ENSSTUP00000090688
Si:dkey-63b1.1.
    
 0.937
ENSSTUP00000113915
Si:dkey-63b1.1.
    
 0.937
LOC115159185
Angiotensin-converting enzyme-like.
    
 0.891
LOC115200950
Angiotensin-converting enzyme-like.
    
 0.891
LOC115205223
Malate synthase-like.
  
 
 0.889
LOC115158488
Collectrin-like.
    
 0.860
LOC115192412
Collectrin-like.
    
 0.860
LOC115188686
Angiotensin-converting enzyme 2-like.
    
 0.860
LOC115188791
Angiotensin-converting enzyme 2-like.
    
 0.860
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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