STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rcbtb2RCC1 and BTB domain containing protein 2. (578 aa)    
Predicted Functional Partners:
RANBP2
RAN binding protein 2.
   
 0.775
ENSSTUP00000027355
annotation not available
   
 0.775
LOC115161061
E3 SUMO-protein ligase RanBP2-like.
   
 0.775
ND4
NADH dehydrogenase subunit 4.
    
 
 0.772
ENSSTUP00000027140
annotation not available
   
 0.704
ENSSTUP00000063902
annotation not available
   
 0.704
rnf8
Ring finger protein 8.
   
  0.696
LOC115193571
AN1-type zinc finger protein 4-like.
    
 0.681
LOC115153369
AN1-type zinc finger protein 4-like.
    
 0.681
LOC115205866
Cullin-3-like.
    
 0.673
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.