Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115158067annotation not available (495 aa)    
Predicted Functional Partners:
LOC115175927
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial-like.
 
 0.995
LOC115177377
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial-like.
 
 0.995
LOC115197019
Dihydrolipoyl dehydrogenase, mitochondrial-like.
 
 0.994
LOC115192726
Dihydrolipoyl dehydrogenase, mitochondrial-like.
 
 0.994
bckdha
Branched chain keto acid dehydrogenase E1 subunit alpha.
 
 0.993
LOC115194727
Protein phosphatase 1K, mitochondrial-like.
   
 0.973
LOC115202267
Protein phosphatase 1K, mitochondrial-like.
   
 0.973
LOC115196214
propionyl-CoA carboxylase beta chain, mitochondrial-like.
  
 
 0.960
LOC115183341
propionyl-CoA carboxylase beta chain, mitochondrial-like.
  
 
 0.960
ivd
isovaleryl-CoA dehydrogenase.
  
 0.955
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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