Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc2a8Solute carrier family 2 member 8. (498 aa)    
Predicted Functional Partners:
ENSSTUP00000049480
RNA transcription, translation and transport factor.
    
 0.752
LOC115162635
RNA transcription, translation and transport factor protein.
    
 0.752
ENSSTUP00000103851
DEAD (Asp-Glu-Ala-Asp) box helicase 1.
    
 0.749
ENSSTUP00000041728
Glucosidase, beta (bile acid) 2.
    
 0.727
asah2
N-acylsphingosine amidohydrolase 2.
     
 0.703
smpd2
Sphingomyelin phosphodiesterase 2.
     
 0.682
LOC115148788
AP-2 complex subunit beta.
    
  0.675
LOC115154253
AP-2 complex subunit beta-like.
    
  0.675
LOC115200193
AP-1 complex subunit beta-1-like.
    
  0.675
ENSSTUP00000098992
Adaptor related protein complex 1 subunit beta 1.
    
  0.675
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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