Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115162937Transmembrane protein 136-like. (242 aa)    
Predicted Functional Partners:
ENSSTUP00000009492
annotation not available
      
 0.553
POMP
Proteasome maturation protein-like.
      
 0.553
LOC115152465
Proteasome maturation protein-like.
      
 0.553
ENSSTUP00000023789
Tubulin tyrosine ligase-like family, member 10.
      
 0.482
LOC115176039
RNA-binding motif, single-stranded-interacting protein 3.
      
 0.441
LOC115173306
RNA-binding motif, single-stranded-interacting protein 3-like.
      
 0.441
tmco1
Transmembrane and coiled-coil domains 1.
      
 0.433
ENSSTUP00000002783
GDP-mannose 4,6-dehydratase.
      
 0.419
LOC115203839
1-acyl-sn-glycerol-3-phosphate acyltransferase alpha-like.
      
 0.413
LOC115159846
1-acyl-sn-glycerol-3-phosphate acyltransferase alpha-like.
      
 0.413
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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