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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000008024Family with sequence similarity 155 member A. (401 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 
 0.996
UNC79-2
Unc-79 homolog, NALCN channel complex subunit.
    
 
 0.996
ENSSTUP00000053353
Sodium leak channel, non-selective.
   
 
 0.958
ENSSTUP00000061902
Unc-80 homolog (C. elegans).
    
 
 0.873
ENSSTUP00000092238
annotation not available
    
 
 0.873
ENSSTUP00000013003
Calcium channel, voltage-dependent, R type, alpha 1E subunit b.
   
 
 0.610
ENSSTUP00000019138
Sodium channel, voltage gated, type VIII, alpha subunit b.
   
 
 0.610
ENSSTUP00000022735
Calcium channel, voltage-dependent, N type, alpha 1B subunit, b.
   
 
 0.610
ENSSTUP00000027256
annotation not available
   
 
 0.610
ENSSTUP00000027409
annotation not available
   
 
 0.610
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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