STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115152205Protein mono-ADP-ribosyltransferase PARP12-like. (668 aa)    
Predicted Functional Partners:
aifm1
Apoptosis inducing factor mitochondria associated 1.
  
 0.586
ENSSTUP00000080953
Histone deacetylase 11.
   
  0.571
ifih1
Interferon induced with helicase C domain 1.
   
 
 0.520
ddx58
DExD/H-box helicase 58.
   
 
 0.510
parp4
poly(ADP-ribose) polymerase family member 4.
    
 
 0.492
ENSSTUP00000035033
annotation not available
    
 
 0.492
parp1
poly(ADP-ribose) polymerase 1.
    
 
 0.492
ENSSTUP00000004154
annotation not available
   
  0.490
LOC115174133
Probable histone deacetylase 1-B.
   
  0.490
HDAC1
Probable histone deacetylase 1-B.
   
  0.490
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.