Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sucoSUN domain containing ossification factor. (1296 aa)    
Predicted Functional Partners:
LOC115205096
Transmembrane anterior posterior transformation protein 1 homolog.
    
 
 0.723
LOC115170500
Transmembrane anterior posterior transformation protein 1 homolog.
    
 
 0.723
ENSSTUP00000083215
annotation not available
    
 
 0.723
LOC115183508
Transmembrane anterior posterior transformation protein 1 homolog.
    
 
 0.723
LOC115157691
V-type proton ATPase subunit H-like.
     
  0.690
LOC115170258
V-type proton ATPase subunit H.
     
  0.690
LOC115203536
V-type proton ATPase subunit d 1.
     
  0.663
LOC115156669
V-type proton ATPase subunit d 1-like.
     
  0.663
ENSSTUP00000087113
annotation not available
     
  0.663
plpp6
Phospholipid phosphatase 6.
      
 0.659
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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