Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
foxred1FAD dependent oxidoreductase domain containing 1. (507 aa)    
Predicted Functional Partners:
LOC115176196
NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-like.
    
 
 0.925
LOC115173474
NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-like.
    
 
 0.925
ENSSTUP00000086214
Si:ch1073-228b5.2.
   
 
 0.904
acad9
acyl-CoA dehydrogenase family member 9.
   
 0.886
acadvl
acyl-CoA dehydrogenase very long chain.
   
 0.886
ENSSTUP00000093730
annotation not available
   
 0.886
ndufaf1
NADH:ubiquinone oxidoreductase complex assembly factor 1.
   
 
 0.856
LOC115177854
Transmembrane protein 186-like.
   
 
 0.848
LOC115147394
Transmembrane protein 186-like.
   
 
 0.848
ND3
NADH dehydrogenase subunit 3.
     
 0.839
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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