Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000008963annotation not available (540 aa)    
Predicted Functional Partners:
LOC115193965
B-cell linker protein-like.
   
 0.941
LOC115153046
B-cell linker protein-like.
   
 0.941
LOC115153940
Lymphocyte cytosolic protein 2-like.
   
 0.939
LOC115148480
Lymphocyte cytosolic protein 2-like.
   
 0.939
ENSSTUP00000042550
annotation not available
   
 0.899
plcg2
Phospholipase C gamma 2.
   
 0.899
LOC115158661
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1-like.
   
 0.899
ENSSTUP00000090576
Phospholipase C, gamma 1.
   
 0.899
LOC115205602
Lymphocyte cytosolic protein 2-like.
   
 0.887
LOC115192548
Tyrosine-protein kinase ZAP-70-like.
   
 0.840
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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