Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115171343G-protein coupled receptor family C group 5 member D-like. (459 aa)    
Predicted Functional Partners:
LOC115161150
Probable G-protein coupled receptor 156.
     
 0.540
gpr156
G protein-coupled receptor 156.
     
 0.540
LOC115195719
ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1-like.
    
 
 0.524
LOC115185221
CKLF-like MARVEL transmembrane domain-containing protein 8.
      
 0.516
ENSSTUP00000012106
annotation not available
      
 0.516
ENSSTUP00000012127
annotation not available
      
 0.516
ENSSTUP00000109933
annotation not available
      
 0.516
haus3
HAUS augmin like complex subunit 3.
    
 0.506
RNF207
RING finger protein 207-like.
      
 0.496
LOC115166272
RING finger protein 207-like.
      
 0.496
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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