STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tiam1TIAM Rac1 associated GEF 1. (1664 aa)    
Predicted Functional Partners:
PARD3
Par-3 family cell polarity regulator.
    
 0.911
PARD3-2
Partitioning defective 3 homolog.
    
 0.910
PARD3-3
Partitioning defective 3 homolog.
    
 0.910
LOC115167650
Phosphatidylinositol 3-kinase regulatory subunit alpha-like.
     
 0.855
LOC115157257
Phosphatidylinositol 3-kinase regulatory subunit gamma-like.
     
 0.853
LOC115169527
Phosphatidylinositol 3-kinase regulatory subunit gamma-like.
     
 0.853
LOC115199743
Rho-related BTB domain-containing protein 2-like.
    
 0.834
LOC115164936
Rho-related BTB domain-containing protein 2-like.
    
 0.834
RAC1
Ras-related C3 botulinum toxin substrate 1-like.
    
 0.820
RAC1-2
Ras-related C3 botulinum toxin substrate 1.
    
 0.820
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.