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Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115166736Photoreceptor-specific nuclear receptor-like. (425 aa)    
Predicted Functional Partners:
med1
Mediator complex subunit 1.
    
  0.792
LOC115154316
Nuclear receptor corepressor 1-like.
    
 0.771
LOC115148853
Nuclear receptor corepressor 1-like.
    
 0.771
ENSSTUP00000042204
Nuclear receptor corepressor 2.
    
 0.771
ENSSTUP00000085904
Nuclear receptor corepressor 2.
    
 0.771
rere
Arginine-glutamic acid dipeptide repeats.
    
 0.749
ENSSTUP00000019894
Arginine-glutamic acid dipeptide (RE) repeats b.
    
 0.749
ENSSTUP00000028194
Arginine-glutamic acid dipeptide (RE) repeats a.
    
 0.749
ENSSTUP00000086612
Atrophin 1.
    
 0.749
ENSSTUP00000098417
Arginine-glutamic acid dipeptide (RE) repeats b.
    
 0.749
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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