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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115163846capZ-interacting protein-like. (347 aa)    
Predicted Functional Partners:
ENSSTUP00000074460
WAS protein family homolog 1.
    
 
 0.899
LOC115152062
WASH complex subunit 1-like.
    
 
 0.899
washc4
WASH complex subunit 4.
   
 
 0.843
LOC115180022
WASH complex subunit 3.
    
 
 0.826
LOC115180022-2
WASH complex subunit 3-like.
    
 
 0.826
LOC115187871
WASH complex subunit 5-like.
   
 
 0.821
LOC115187872
WASH complex subunit 5.
   
 
 0.821
slf1
SMC5-SMC6 complex localization factor 1.
    
 
 0.754
LOC115159645
Vacuolar protein sorting-associated protein 29.
    
 
 0.735
ENSSTUP00000078970
VPS29 retromer complex component.
    
 
 0.735
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.