Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC115155522NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial-like. (361 aa)    
Predicted Functional Partners:
LOC115152231
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial-like.
   
 0.998
ndufb8
NADH:ubiquinone oxidoreductase subunit B8.
   
 0.998
ndufs4
NADH:ubiquinone oxidoreductase subunit S4.
   
 0.997
LOC115202869
NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial-like.
   
 0.997
LOC115167536
NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial-like.
   
 0.997
ndufs2
NADH:ubiquinone oxidoreductase core subunit S2.
   
 0.997
ENSSTUP00000096965
NADH:ubiquinone oxidoreductase core subunit S2.
   
 0.997
LOC115163851
NADH dehydrogenase [ubiquinone] 1 subunit C2-like.
   
 0.996
ENSSTUP00000040001
NADH:ubiquinone oxidoreductase subunit B5.
   
 0.996
ENSSTUP00000062890
NADH:ubiquinone oxidoreductase subunit B5.
   
 0.996
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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