Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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[Homology]
Score
LOC115171365FAD-dependent oxidoreductase domain-containing protein 2-like. (692 aa)    
Predicted Functional Partners:
txndc16
Thioredoxin domain containing 16.
   
 
 0.936
ndufaf3
NADH:ubiquinone oxidoreductase complex assembly factor 3.
    
   0.850
LOC115174632
Protein sel-1 homolog 1-like.
   
 
 0.834
ENSSTUP00000064245
annotation not available
   
 
 0.834
LOC115195260
Protein sel-1 homolog 1-like.
   
 
 0.834
os9
OS9 endoplasmic reticulum lectin.
    
 
 0.742
LOC115201555
Endoplasmic reticulum lectin 1-like.
    
 
 0.742
ENSSTUP00000038875
annotation not available
    
 
 0.742
LOC115152807
Endoplasmic reticulum lectin 1-like.
    
 
 0.742
aldh7a1
Aldehyde dehydrogenase 7 family member A1.
  
 
 0.733
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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