Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115149199Calcineurin B homologous protein 3-like. (216 aa)    
Predicted Functional Partners:
ENSSTUP00000029246
Solute carrier family 9 member 2.
    
 0.833
SLC9A1
Solute carrier family 9 member A1.
    
 0.833
LOC115175592
Na(+)/H(+) exchanger beta.
    
 0.833
LOC115177122
Sodium/hydrogen exchanger 1-like.
    
 0.833
ENSSTUP00000112729
annotation not available
    
 0.833
LOC115164667
Anaphase-promoting complex subunit 7-like.
     
 0.766
SLC9A3
Sodium/hydrogen exchanger 3-like.
    
 0.766
LOC115176105
Sodium/hydrogen exchanger 3-like.
    
 0.766
ENSSTUP00000113860
annotation not available
    
 0.766
PPP3CA
Protein phosphatase 3 catalytic subunit alpha.
    
 0.764
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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