STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000010045Cyclin-dependent kinase 15. (459 aa)    
Predicted Functional Partners:
LOC115205091
cyclin-A2-like.
   
 0.899
ccna1
Cyclin A1.
   
 0.899
LOC115153320
Anaphase-promoting complex subunit 1-like.
    
 0.888
LOC115158623
Maternal DNA replication licensing factor mcm3-like.
   
 0.887
ENSSTUP00000002048
Anaphase promoting complex subunit 10.
   
 0.886
LOC115208694
Cell division control protein 6 homolog.
   
 0.878
LOC115177789
Cell division control protein 6 homolog.
   
 0.878
ENSSTUP00000103044
Origin recognition complex, subunit 1.
   
 0.877
rb1
RB transcriptional corepressor 1.
   
 0.876
ENSSTUP00000015624
annotation not available
   
 0.871
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.