STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000010053annotation not available (891 aa)    
Predicted Functional Partners:
ENSSTUP00000053705
annotation not available
    
 
 0.763
ENSSTUP00000011732
annotation not available
    
 
 0.590
LOC115159459
Spindle and kinetochore-associated protein 1-like.
    
 
 0.590
srm
Spermidine synthase.
   
  
 0.553
LOC115203992
POU domain, class 5, transcription factor 1-like.
   
 
 0.552
LOC115159657
POU domain, class 5, transcription factor 1-like.
   
 
 0.552
LOC115164214
Steroidogenic acute regulatory protein, mitochondrial.
    
 
 0.549
LOC115199640
Steroidogenic acute regulatory protein, mitochondrial-like.
    
 
 0.549
ENSSTUP00000006427
annotation not available
      
 0.546
pgap3
post-GPI attachment to proteins phospholipase 3.
      
 0.546
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.