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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HACD3-2Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase-like. (360 aa)    
Predicted Functional Partners:
LOC115153062
Very-long-chain enoyl-CoA reductase-like.
   
 0.973
ENSSTUP00000046088
annotation not available
   
 0.973
LOC115204184
Very-long-chain enoyl-CoA reductase-like.
   
 0.965
LOC115178551
Very-long-chain enoyl-CoA reductase-like.
   
 0.965
LOC115183312
Very-long-chain enoyl-CoA reductase.
   
 0.965
LOC115171561
Very-long-chain enoyl-CoA reductase-like.
   
 0.965
LOC115166784
Very-long-chain 3-oxoacyl-CoA reductase-B-like.
   
 0.951
LOC115166784-2
Very-long-chain 3-oxoacyl-CoA reductase-B-like.
   
 0.951
LOC115154395
Very-long-chain 3-oxoacyl-CoA reductase-B-like.
   
 0.951
LOC115154421
Very-long-chain 3-oxoacyl-CoA reductase-like.
   
 0.951
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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