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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NACC2Nucleus accumbens-associated protein 2-like. (587 aa)    
Predicted Functional Partners:
LOC115149877
Homeobox protein pv.1-like.
    
 
 0.696
ENSSTUP00000023803
Adenylate kinase 9.
    
  0.594
ENSSTUP00000053802
Mitochondrial ribosomal protein S10.
    
 0.580
LOC115155632
BRCA1-associated RING domain protein 1-like.
    
  0.562
LOC115205834
RING finger protein 151-like.
    
 0.550
RPS2
RING finger protein 151-like.
    
 0.550
LOC115203992
POU domain, class 5, transcription factor 1-like.
    
 0.548
LOC115159657
POU domain, class 5, transcription factor 1-like.
    
 0.548
mrps6
Mitochondrial ribosomal protein S6.
    
  0.535
ENSSTUP00000088155
Mitochondrial ribosomal protein S28.
    
  0.535
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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