STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000010075Glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein, b. (937 aa)    
Predicted Functional Partners:
ift57
Intraflagellar transport 57.
    
 0.839
ENSSTUP00000018315
Intraflagellar transport 172.
    
 0.832
ENSSTUP00000013955
Intraflagellar transport 80 homolog (Chlamydomonas).
    
 0.831
ift88
Intraflagellar transport 88.
    
 0.817
cluap1
Clusterin associated protein 1.
    
 0.796
ift52
Intraflagellar transport 52.
    
 0.792
LOC115156169
TRAF3-interacting protein 1-like.
    
 0.774
LOC115160645
TRAF3-interacting protein 1-like.
    
 0.774
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.756
ENSSTUP00000018705
Calcium/calmodulin-dependent serine protein kinase b.
    
 0.756
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.