Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSSTUP00000010075Glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein, b. (937 aa)    
Predicted Functional Partners:
suox
Sulfite oxidase.
     
  0.874
ift57
Intraflagellar transport 57.
    
 0.752
ENSSTUP00000037682
Glutamate receptor, ionotropic, delta 2.
   
 
 0.732
ENSSTUP00000043459
annotation not available
   
 
 0.732
ENSSTUP00000043581
Glutamate receptor, ionotropic, delta 1b.
   
 
 0.732
LOC115193698
Glutamate receptor ionotropic, delta-1-like.
   
 
 0.732
LOC115157518
Glutamate receptor ionotropic, delta-1-like.
   
 
 0.732
ENSSTUP00000070721
Glutamate receptor, ionotropic, delta 2.
   
 
 0.732
ENSSTUP00000102574
Glutamate receptor, ionotropic, delta 1a.
   
 
 0.732
ift88
Intraflagellar transport 88.
    
 0.728
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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