Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115163190Flocculation protein FLO11-like. (489 aa)    
Predicted Functional Partners:
LOC115168694
ATP synthase F(0) complex subunit B1, mitochondrial-like.
   
 0.994
LOC115165321
ATP synthase F(0) complex subunit B1, mitochondrial-like.
   
 0.994
LOC115171904
ATP synthase subunit d, mitochondrial-like.
   
 0.994
LOC115197234
ATP synthase subunit g, mitochondrial-like.
   
 0.993
LOC115154975
ATP synthase subunit g, mitochondrial-like.
   
 0.993
LOC115195919
ATP synthase-coupling factor 6, mitochondrial-like.
   
 0.992
LOC115171904-2
ATP synthase subunit d, mitochondrial-like.
   
 0.992
LOC115179115
ATP synthase-coupling factor 6, mitochondrial-like.
   
 0.992
LOC115151812
ATP synthase subunit delta, mitochondrial-like.
   
 0.989
LOC115158220
ATP synthase subunit delta, mitochondrial-like.
   
 0.989
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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