Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM250Transmembrane protein 250-like. (139 aa)    
Predicted Functional Partners:
ENSSTUP00000022849
Septin 4a.
   
 0.614
ENSSTUP00000023015
annotation not available
   
 0.614
ENSSTUP00000025802
annotation not available
   
 0.614
LOC115196896
Septin-7-like.
   
 0.614
LOC115170012
septin-2B-like.
   
 0.614
ENSSTUP00000072589
Si:dkey-256h2.1.
   
 0.614
LOC115178049
Septin-7.
   
 0.614
LOC115156692
septin-2B.
   
 0.614
LOC115164365
Septin-2-like.
   
 0.614
LOC115164364
Septin-5.
   
 0.614
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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