Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115168637Ribonuclease H2 subunit C-like. (169 aa)    
Predicted Functional Partners:
ENSSTUP00000008434
annotation not available
   
 0.972
LOC115161241
Ribonuclease H2 subunit B-like.
   
 0.972
LOC115177955
Ribonuclease H2 subunit A-like.
   
 0.971
LOC115147382
Ribonuclease H2 subunit A-like.
   
 0.971
ENSSTUP00000001333
Flap structure-specific endonuclease 1.
   
 
 0.760
FEN1
Flap structure-specific endonuclease 1.
   
 
 0.760
ENSSTUP00000102619
Zgc:110269.
   
 
 0.760
FIG4
FIG4 phosphoinositide 5-phosphatase.
     
 0.715
PCNA
Proliferating cell nuclear antigen.
   
   0.667
ENSSTUP00000010958
Proliferating cell nuclear antigen.
   
   0.655
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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