Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115147594M-phase inducer phosphatase 1-like. (468 aa)    
Predicted Functional Partners:
ENSSTUP00000053971
Checkpoint kinase 1.
   
 0.973
LOC115199789
Serine/threonine-protein kinase Chk2-like.
   
 0.948
LOC115164873
Serine/threonine-protein kinase Chk2-like.
   
 0.948
ccne1
Cyclin E1.
   
 0.942
ccne2
Cyclin E2.
   
 0.942
LOC115202935
G1/S-specific cyclin-E1-like.
   
 0.942
ENSSTUP00000093972
Cyclin E2.
   
 0.942
plk2
Polo like kinase 2.
   
 0.908
LOC115169771
Serine/threonine-protein kinase PLK3-like.
   
 0.908
PLK1
Polo like kinase 1.
   
 0.908
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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